The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization

DC FieldValueLanguage
dc.contributor.authorNishiyama, Tomoaki
dc.contributor.authorSakayama, Hidetoshi
dc.contributor.authorde Vries, Jan
dc.contributor.authorBuschmann, Henrik
dc.contributor.authorSaint-Marcoux, Denis
dc.contributor.authorUllrich, Kristian K.
dc.contributor.authorHaas, Fabian B.
dc.contributor.authorVanderstraeten, Lisa
dc.contributor.authorBecker, Dirk
dc.contributor.authorLang, Daniel
dc.contributor.authorVosolsobe, Stanislav
dc.contributor.authorRombauts, Stephane
dc.contributor.authorWilhelmsson, Per K. I.
dc.contributor.authorJanitza, Philipp
dc.contributor.authorKern, Ramona
dc.contributor.authorHeyl, Alexander
dc.contributor.authorRuempler, Florian
dc.contributor.authorVillalobos, Luz Irina A. Calderon
dc.contributor.authorClay, John M.
dc.contributor.authorSkokan, Roman
dc.contributor.authorToyoda, Atsushi
dc.contributor.authorSuzuki, Yutaka
dc.contributor.authorKagoshima, Hiroshi
dc.contributor.authorSchijlen, Elio
dc.contributor.authorTajeshwar, Navindra
dc.contributor.authorCatarino, Bruno
dc.contributor.authorHetherington, Alexander J.
dc.contributor.authorSaltykova, Assia
dc.contributor.authorBonnot, Clemence
dc.contributor.authorBreuninger, Holger
dc.contributor.authorSymeonidi, Aikaterini
dc.contributor.authorRadhakrishnan, Guru V.
dc.contributor.authorVan Nieuwerburgh, Filip
dc.contributor.authorDeforce, Dieter
dc.contributor.authorChang, Caren
dc.contributor.authorKarol, Kenneth G.
dc.contributor.authorHedrich, Rainer
dc.contributor.authorUlvskov, Peter
dc.contributor.authorGloeckner, Gernot
dc.contributor.authorDelwiche, Charles F.
dc.contributor.authorPetrasek, Jan
dc.contributor.authorVan de Peer, Yves
dc.contributor.authorFriml, Jiri
dc.contributor.authorBeilby, Mary
dc.contributor.authorDolan, Liam
dc.contributor.authorKohara, Yuji
dc.contributor.authorSugano, Sumio
dc.contributor.authorFujiyama, Asao
dc.contributor.authorDelaux, Pierre-Marc
dc.contributor.authorQuint, Marcel
dc.contributor.authorTheissen, Gunter
dc.contributor.authorHagemann, Martin
dc.contributor.authorHarholt, Jesper
dc.contributor.authorDunand, Christophe
dc.contributor.authorZachgo, Sabine
dc.contributor.authorLangdale, Jane
dc.contributor.authorMaumus, Florian
dc.contributor.authorVan Der Straeten, Dominique
dc.contributor.authorGould, Sven B.
dc.contributor.authorRensing, Stefan A.
dc.date.accessioned2021-12-23T16:24:20Z-
dc.date.available2021-12-23T16:24:20Z-
dc.date.issued2018
dc.identifier.issn00928674
dc.identifier.urihttps://osnascholar.ub.uni-osnabrueck.de/handle/unios/14846-
dc.description.abstractLand plants evolved from charophytic algae, among which Charophyceae possess the most complex body plans. We present the genome of Chara braunii; comparison of the genome to those of land plants identified evolutionary novelties for plant terrestrialization and land plant heritage genes. C. braunii employs unique xylan synthases for cell wall biosynthesis, a phragmoplast (cell separation) mechanism similar to that of land plants, and many phytohormones. C. braunii plastids are controlled via landplant- like retrograde signaling, and transcriptional regulation is more elaborate than in other algae. The morphological complexity of this organism may result from expanded gene families, with three cases of particular note: genes effecting tolerance to reactive oxygen species (ROS), LysM receptor-like kinases, and transcription factors (TFs). Transcriptomic analysis of sexual reproductive structures reveals intricate control by TFs, activity of the ROS gene network, and the ancestral use of plant-like storage and stress protection proteins in the zygote.
dc.description.sponsorshipMEXTMinistry of Education, Culture, Sports, Science and Technology, Japan (MEXT); JSPS KAKENHIMinistry of Education, Culture, Sports, Science and Technology, Japan (MEXT)Japan Society for the Promotion of ScienceGrants-in-Aid for Scientific Research (KAKENHI) [17020008, 20017013, 22128008, 15H04413, 24370095, 22770083, 24570100, 15K07185, 221S0002]; Hyogo Science and Technology Association grant; DFGGerman Research Foundation (DFG)European Commission [GO1825/4-1, CRC1208, VR 132/1-1, SFB 944, FOR964, SFB 924]; MEYS CR project [LO1417]; Carlsberg FoundationCarlsberg Foundation; Villum Foundation's Young Investigator Programme; LRSV laboratory [ANR-10-LABX-41]; Gent University; Research Foundation FlandersFWO [G.0317.17N, 1S17917N]; ERC Advanced Grants [EVO500]; Leibniz Association; NSFNational Science Foundation (NSF) [DEB-1020660, DEB-1036466, MCB1714993, DEB 1036506]; BBSRCUK Research & Innovation (UKRI)Biotechnology and Biological Sciences Research Council (BBSRC) [BB/M020517/1] Funding Source: UKRI; We thank K. Yamada, M. Gottig, M. Schallenberg-Rudinger, and F. Donges for technical assistance and S. Kato for kind assistance with strain isolation. Financial support was provided by MEXT & JSPS KAKENHI (17020008 to Y.K., Y.S., and S.S.; 20017013, 22128008, 15H04413, and 24370095 to T.N.; 22770083, 24570100, and 15K07185 to H.S.; and 221S0002 to A.T., A.F., Y.S., and S.S.); a Hyogo Science and Technology Association grant to H.S.; the DFG (GO1825/4-1 and CRC1208 to S.B.G., VR 132/1-1 to J.d.V., SFB 944 to H.B. and S.Z., FOR964 to D.B. and R.H., and SFB 924 to D.L.); MEYS CR project (LO1417 to S.V., R.S., and J.P.); the Carlsberg Foundation and the Villum Foundation's Young Investigator Programme to J.H.; the LRSV laboratory (ANR-10-LABX-41) to P.-M.D.; Gent University to D.v.d.S.; Research Foundation Flanders (G.0317.17N to D.v.d.S. and PhD fellowship 1S17917N to L.V.); ERC Advanced Grants (EVO500 to L.D., ETAP to J.F., and EDIP to J.L.); the Leibniz Association to M.Q.; and the NSF (DEB-1020660 and DEB-1036466 to K.G.K., MCB1714993 to C.C., and DEB 1036506 to C.F.D.). Computation was partially performed at NIG and NIBB, Japan & High Performance, and Cloud Computing University Tubingen, Baden-Wurttemberg bwHPC, Germany.
dc.language.isoen
dc.publisherCELL PRESS
dc.relation.ispartofCELL
dc.subjectANNOTATION
dc.subjectBiochemistry & Molecular Biology
dc.subjectCell Biology
dc.subjectCLASSIFICATION
dc.subjectDATABASE
dc.subjectDOMAIN
dc.subjectEVOLUTION
dc.subjectGENES
dc.subjectMULTIPLE SEQUENCE ALIGNMENT
dc.subjectORIGIN
dc.subjectREVEALS
dc.subjectTRANSCRIPTION FACTORS
dc.titleThe Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization
dc.typejournal article
dc.identifier.doi10.1016/j.cell.2018.06.033
dc.identifier.isiISI:000438482800019
dc.description.volume174
dc.description.issue2
dc.description.startpage448+
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dc.identifier.eissn10974172
dc.publisher.place50 HAMPSHIRE ST, FLOOR 5, CAMBRIDGE, MA 02139 USA
dcterms.isPartOf.abbreviationCell
dcterms.oaStatusGreen Submitted, Bronze
crisitem.author.deptFB 05 - Biologie/Chemie-
crisitem.author.deptUniversität Osnabrück-
crisitem.author.deptFB 05 - Biologie/Chemie-
crisitem.author.deptidfb05-
crisitem.author.deptidfb05-
crisitem.author.orcid0000-0003-3022-6150-
crisitem.author.parentorgUniversität Osnabrück-
crisitem.author.parentorgUniversität Osnabrück-
crisitem.author.netidBuHe301-
crisitem.author.netidThGu001-
crisitem.author.netidZaSa518-
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